PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp5g06020
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassicaceae incertae sedis; Schrenkiella
Family WRKY
Protein Properties Length: 284aa    MW: 32365.2 Da    PI: 6.6233
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp5g06020genomethellungiellaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.81.6e-26125185259
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                +D ++WrKYGqKe+ +++fprsY+rCt++   gC+++k+v++ + +p++++itY+g+H+++
  Tp5g06020 125 EDAFSWRKYGQKEILNARFPRSYFRCTHKysqGCKATKQVQKLELEPTMFNITYNGNHTCN 185
                7***************************99999**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.1E-26111185IPR003657WRKY domain
SuperFamilySSF1182903.53E-23118186IPR003657WRKY domain
PROSITE profilePS5081119.967119187IPR003657WRKY domain
SMARTSM007741.7E-35124186IPR003657WRKY domain
PfamPF031062.8E-24125184IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MDIASNTKAI KLKVMDKLVQ GHKFTTKLQQ VHSQLGLGPA EDLVEKILES FNDAISALGS  60
FELVSSSSLV TAVEGSQNAS CDNNDGKLDD SGDSRKRLGP IKGKRGCYKR KKRSETWTVE  120
STVFEDAFSW RKYGQKEILN ARFPRSYFRC THKYSQGCKA TKQVQKLELE PTMFNITYNG  180
NHTCNTNEAT PKIKPCVHHD DIIMDSEELK STSLTTSMKK EEENHHGSSM ENDLQLVWQE  240
ILVCEEEDHY HHHHHETFYG CGETSASIND LDSTDLWSWQ RFPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194112RKRLGPIKGKRGCYKRKKR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001288847.11e-152probable WRKY transcription factor 70
RefseqXP_013648025.11e-152PREDICTED: probable WRKY transcription factor 70
SwissprotQ9LY001e-129WRK70_ARATH; Probable WRKY transcription factor 70
TrEMBLM4CGA61e-155M4CGA6_BRARP; Uncharacterized protein
STRINGBra003239.1-P1e-154(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40612757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-104WRKY DNA-binding protein 70